Phentrieve
Phentrieve supports the extraction of Human Phenotype Ontology terms from clinical free text using sentence-transformer models.
Relevant phenotypic information is often recorded in free text. Structuring it as HPO terms makes it easier to use in genetic diagnostics and research workflows.
As a co-developer, I build functionality for clinical text processing, model-based phenotype extraction and the integration of structured medical information. I also conduct scientific evaluations of the methods and their suitability for clinical and research applications.